Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_3238TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; KEGG: bms:BR1898 acyl-CoA thioesterase II. (288 aa)    
Predicted Functional Partners:
Meso_3239
TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: mlo:mlr4251 2-octaprenyl-6-methoxyphenol 4-monoxygenase, ubiH.
     
 0.679
Meso_3240
PFAM: OsmC-like protein; KEGG: mlo:mlr4254 osmotically inducible protein C, putative ATP/GTP binding protein.
     
 0.568
Meso_3237
PFAM: nitrogen regulatory protein P-II; KEGG: atc:AGR_C_4999 probable nitrogen regulatory protein; Belongs to the P(II) protein family.
       0.536
Meso_0021
PFAM: Enoyl-CoA hydratase/isomerase 3-hydroxyacyl-CoA dehydrogenase-like 3-hydroxyacyl-CoA dehydrogenase, NAD-binding NAD-dependent glycerol-3-phosphate dehydrogenase-like; KEGG: mlo:mlr5629 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase.
 
 
 0.516
Meso_2797
PFAM: MaoC-like dehydratase; KEGG: mlo:mlr3097 nodulation protein NodN-Rhizobium leguminosarum.
  
 
 0.505
Meso_3236
TIGRFAM: ammonium transporter; PFAM: Rh-like protein/ammonium transporter; KEGG: atc:AGR_C_5001 probable ammonium transporter protein; TC 1.A.11.
       0.493
Meso_3751
PFAM: Enoyl-CoA hydratase/isomerase 3-hydroxyacyl-CoA dehydrogenase-like 6-phosphogluconate dehydrogenase, NAD-binding 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: bpm:BURPS1710b_0633 enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase.
 
 
 0.490
Meso_3316
PFAM: NUDIX hydrolase; KEGG: ret:RHE_CH00128 putative NTP pyrophosphohydrolase protein, MutT/NUDIX family (responsible for removing an oxidativelydamaged form of guanine from DNA and the nucleotide pool).
  
   
 0.423
Meso_1524
PFAM: Enoyl-CoA hydratase/isomerase 3-hydroxyacyl-CoA dehydrogenase-like 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: nwi:Nwi_2993 3-hydroxyacyl-CoA dehydrogenase NAD-binding.
  
 
 0.409
Meso_3175
TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily; KEGG: mlo:mll3892 hypothetical protein.
     
 0.400
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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