Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_3284PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: jan:Jann_3769 monooxygenase, FAD-binding. (554 aa)    
Predicted Functional Partners:
Meso_3285
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: chy:CHY_1736 enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.760
Meso_2428
PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: sil:SPO0833 formate dehydrogenase, beta subunit.
   
 
 0.699
Meso_0813
PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: reu:Reut_B3601 salicylate 1-monooxygenase.
  
   
 0.696
Meso_3276
Gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel; KEGG: eba:ebA5613 putative gentisate 1,2-dioxygenase oxidoreductase protein.
 
   
 0.647
Meso_1117
PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: mlo:mll8158 salicylate hydroxylase.
  
   
 0.640
Meso_2927
PFAM: monooxygenase, FAD-binding; KEGG: bja:bll2502 hypothetical protein.
  
   
 0.628
Meso_0052
3-hydroxybenzoate 6-hydroxylase; PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B1886 monooxygenase, FAD-binding.
  
   
 0.617
Meso_2931
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nar:Saro_0713 glyoxalase/bleomycin resistance protein/dioxygenase.
 
   
 0.552
Meso_2934
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_C7651 glyoxalase/bleomycin resistance protein/dioxygenase.
 
   
 0.522
Meso_0053
TIGRFAM: gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel; KEGG: pae:PA2470 gentisate 1,2-dioxygenase.
 
   
 0.513
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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