Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_3287PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: rso:RSc1203 NADPH quinone oxidoreductase, putative. (327 aa)    
Predicted Functional Partners:
Meso_2580
TIGRFAM: amino acid adenylation domain; PFAM: beta-ketoacyl synthase AMP-dependent synthetase and ligase acyl transferase region condensation domain aminotransferase class-III phosphopantetheine-binding; KEGG: rpa:RPA3339 possible polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.896
Meso_2797
PFAM: MaoC-like dehydratase; KEGG: mlo:mlr3097 nodulation protein NodN-Rhizobium leguminosarum.
 0.828
Meso_1318
PFAM: beta-ketoacyl synthase; KEGG: mlo:mlr1177 3-oxoacyl-acyl carrier protein synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
  
 0.689
Meso_3701
PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: oih:OB2752 sorbitol dehydrogenase.
 
  
 0.551
Meso_2581
PFAM: condensation domain phosphopantetheine-binding; KEGG: ava:Ava_1613 non-ribosomal peptide synthase.
  
 
 0.545
Meso_3286
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bja:blr2779 hypothetical protein; Belongs to the CoA-transferase III family.
  
  
 0.518
Meso_2536
PFAM: AMP-dependent synthetase and ligase; KEGG: mlo:mlr7293 acyl-CoA synthase.
  
 0.487
Meso_3543
PFAM: AMP-dependent synthetase and ligase; KEGG: pae:PA3860 acyl-CoA synthase.
  
 0.480
Meso_0980
KEGG: mlo:mll7824 2-acylglycerophosphoethanolamine acyl transferase/acyl carrier protein synthetase.
  
 0.468
Meso_3288
PFAM: Uncharacterized protein UPF0065; KEGG: reu:Reut_B3558 uncharacterized protein UPF0065.
       0.468
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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