Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Meso_3327KEGG: bmb:BruAb1_1768 hypothetical protein. (117 aa)    
Predicted Functional Partners:
Meso_3324
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: bja:blr5672 ABC transporter permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
     0.892
Meso_3325
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: atc:AGR_C_4398 ATPase; TC 3.A.1.4.-.
 
     0.884
Meso_3323
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: bja:blr5671 ABC transporter permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
     0.851
Meso_3326
General L-amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase; KEGG: mlo:mll3974 ATP-binding component of ABC transporter.
 
     0.842
Meso_3328
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: rru:Rru_A1746 extracellular ligand-binding receptor; TC 3.A.1.4.-.
 
     0.820
Meso_1288
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: mlo:mll0086 amino acid binding protein; TC 3.A.1.4.-.
  
     0.591
Meso_1039
PFAM: protein of unknown function DUF1467; KEGG: mlo:msl1345 hypothetical protein.
  
     0.478
Meso_3959
SH3, type 3; PFAM: protein of unknown function DUF1058 SH3, type 3; SMART: SH3-like region; KEGG: sme:SMc00062 hypothetical protein.
  
     0.472
Meso_0896
KEGG: mlo:mlr7687 hypothetical protein.
  
     0.427
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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