Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Meso_3356PFAM: protein of unknown function DUF1223; KEGG: mlo:mlr4337 hypothetical protein. (252 aa)    
Predicted Functional Partners:
Meso_3355
KEGG: mlo:mlr4340 hypothetical protein.
 
     0.713
Meso_3357
Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
       0.538
ccmA
Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
 
     0.504
Meso_0351
Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region; KEGG: atc:AGR_C_680 hypothetical protein.
  
     0.480
Meso_3359
Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.
 
     0.475
Meso_2115
KEGG: ath:At1g64980 expressed protein.
  
     0.427
ccmC
Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
 
     0.427
Meso_3416
PFAM: protein of unknown function DUF1674; KEGG: sil:SPO3377 hypothetical protein.
  
     0.425
Meso_1368
PFAM: Uncharacterised conserved protein UCP032025; KEGG: mlo:mll0669 hypothetical protein.
  
     0.407
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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