STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_3385KEGG: mlo:mlr4231 hypothetical protein. (135 aa)    
Predicted Functional Partners:
Meso_4096
KEGG: mlo:mll5591 hypothetical protein.
  
     0.552
Meso_0606
KEGG: sme:SMa1580 hypothetical protein.
  
     0.551
Meso_2189
KEGG: mlo:mlr2795 hypothetical protein.
  
     0.488
asd
Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
       0.488
Meso_3386
KEGG: rru:Rru_A0163 transcriptional regulator, XRE family.
       0.481
Meso_1364
PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mll0676 acetyl transferase.
  
     0.431
Meso_1725
PFAM: type IV pilus assembly PilZ; KEGG: mlo:mll0185 hypothetical protein.
  
     0.416
Meso_2085
KEGG: ret:RHE_CH03836 hypothetical protein.
  
     0.408
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.