Meso_3501 protein (Chelativorans sp. BNC1) - STRING interaction network

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[Homology]

Score

Meso_3501

PFAM: Class I peptide chain release factor; KEGG: mlo:mlr5097 hypothetical protein. (143 aa)

Predicted Functional Partners:

rplU

0.933

rpsP

0.903

rpmA

0.892

rpsL

0.883

rplT

0.879

rpsG

0.871

rplS

0.867

rpmF

0.865

rplQ

0.862

rplB

0.861

Your Current Organism:

Chelativorans sp. BNC1

NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Meso_3501	rplB	Meso_3501	Meso_1675	PFAM: Class I peptide chain release factor; KEGG: mlo:mlr5097 hypothetical protein.	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.861
Meso_3501	rplQ	Meso_3501	Meso_1653	PFAM: Class I peptide chain release factor; KEGG: mlo:mlr5097 hypothetical protein.	PFAM: ribosomal protein L17; KEGG: ret:RHE_CH01700 50S ribosomal protein L17.	0.862
Meso_3501	rplS	Meso_3501	Meso_3445	PFAM: Class I peptide chain release factor; KEGG: mlo:mlr5097 hypothetical protein.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.867
Meso_3501	rplT	Meso_3501	Meso_0674	PFAM: Class I peptide chain release factor; KEGG: mlo:mlr5097 hypothetical protein.	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.879
Meso_3501	rplU	Meso_3501	Meso_3461	PFAM: Class I peptide chain release factor; KEGG: mlo:mlr5097 hypothetical protein.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.933
Meso_3501	rpmA	Meso_3501	Meso_3460	PFAM: Class I peptide chain release factor; KEGG: mlo:mlr5097 hypothetical protein.	PFAM: ribosomal protein L27; KEGG: bmb:BruAb1_1828 RpmA, ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.892
Meso_3501	rpmF	Meso_3501	Meso_3426	PFAM: Class I peptide chain release factor; KEGG: mlo:mlr5097 hypothetical protein.	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: ret:RHE_CH04015 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.865
Meso_3501	rpsG	Meso_3501	Meso_1682	PFAM: Class I peptide chain release factor; KEGG: mlo:mlr5097 hypothetical protein.	SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.871
Meso_3501	rpsL	Meso_3501	Meso_1683	PFAM: Class I peptide chain release factor; KEGG: mlo:mlr5097 hypothetical protein.	SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy.	0.883
Meso_3501	rpsP	Meso_3501	Meso_3339	PFAM: Class I peptide chain release factor; KEGG: mlo:mlr5097 hypothetical protein.	PFAM: ribosomal protein S16; KEGG: bmb:BruAb1_1803 RpsP, ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.903
rplB	Meso_3501	Meso_1675	Meso_3501	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	PFAM: Class I peptide chain release factor; KEGG: mlo:mlr5097 hypothetical protein.	0.861
rplB	rplQ	Meso_1675	Meso_1653	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	PFAM: ribosomal protein L17; KEGG: ret:RHE_CH01700 50S ribosomal protein L17.	0.992
rplB	rplS	Meso_1675	Meso_3445	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.981
rplB	rplT	Meso_1675	Meso_0674	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.984
rplB	rplU	Meso_1675	Meso_3461	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.986
rplB	rpmA	Meso_1675	Meso_3460	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	PFAM: ribosomal protein L27; KEGG: bmb:BruAb1_1828 RpmA, ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.978
rplB	rpmF	Meso_1675	Meso_3426	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: ret:RHE_CH04015 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.970
rplB	rpsG	Meso_1675	Meso_1682	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.995
rplB	rpsL	Meso_1675	Meso_1683	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy.	0.995
rplB	rpsP	Meso_1675	Meso_3339	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	PFAM: ribosomal protein S16; KEGG: bmb:BruAb1_1803 RpsP, ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.978