Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_3535PFAM: cytochrome c oxidase, subunit I; KEGG: bbr:BB1284 ubiquinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family. (676 aa)    
Predicted Functional Partners:
Meso_3533
PFAM: cytochrome C oxidase subunit IV; KEGG: psp:PSPPH_1213 cytochrome o ubiquinol oxidase, subunit IV.
 
 0.999
Meso_3534
PFAM: cytochrome c oxidase, subunit III; KEGG: sgl:SG0665 cytochrome o ubiquinol oxidase subunit III.
 0.999
Meso_3536
TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase, subunit II COX aromatic rich; KEGG: pfl:PFL_4735 cytochrome o ubiquinol oxidase, subunit II.
 
 0.999
Meso_2792
PFAM: cytochrome c oxidase, subunit II cytochrome c, class I; KEGG: sme:SMb21368 putative cytochrome c oxidase chain II protein.
 
 0.996
Meso_0746
PFAM: cytochrome c oxidase, subunit III; KEGG: mlo:mlr7496 cytochrome c oxidase subunit III.
 0.980
Meso_2477
PFAM: cytochrome c oxidase, subunit III; KEGG: mlo:mlr1043 cytochrome c oxidase subunit III.
 0.976
Meso_2165
Cytochrome b/b6-like protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.975
Meso_0741
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 0.970
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.955
nuoA
NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
   
 0.955
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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