Meso_3559 protein (Chelativorans sp. BNC1) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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Assay-based Predictions

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co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Chelativorans sp. BNC1

NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Meso_0038	Meso_1115	PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_1481 ABC oligopeptide transporter, perplasmic substrate-binding protein OppA.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2562 polar amino acid ABC transport permease protein aapM-1.	0.863
Meso_0038	Meso_1563	PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_1481 ABC oligopeptide transporter, perplasmic substrate-binding protein OppA.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0953 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.	0.857
Meso_0038	Meso_1564	PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_1481 ABC oligopeptide transporter, perplasmic substrate-binding protein OppA.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0952 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.	0.857
Meso_0038	Meso_2304	PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_1481 ABC oligopeptide transporter, perplasmic substrate-binding protein OppA.	Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tte:TTE0800 ABC-type sugar transport systems, permease components; TC 3.A.1.1.-.	0.624
Meso_0038	Meso_3556	PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_1481 ABC oligopeptide transporter, perplasmic substrate-binding protein OppA.	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related Transport-associated OB; SMART: ATPase; KEGG: rsp:RSP_1445 ABC sugar transporter, ATPase subunit; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.	0.823
Meso_0038	Meso_3558	PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_1481 ABC oligopeptide transporter, perplasmic substrate-binding protein OppA.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1443 ABC sugar transporter, inner membrane subunit; TC 3.A.1.1.-.	0.624
Meso_0038	Meso_3559	PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_1481 ABC oligopeptide transporter, perplasmic substrate-binding protein OppA.	PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_1442 ABC sugar transporter, periplasmic sugar-binding protein; TC 3.A.1.1.-.	0.700
Meso_1115	Meso_0038	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2562 polar amino acid ABC transport permease protein aapM-1.	PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_1481 ABC oligopeptide transporter, perplasmic substrate-binding protein OppA.	0.863
Meso_1115	Meso_1563	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2562 polar amino acid ABC transport permease protein aapM-1.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0953 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.	0.897
Meso_1115	Meso_1564	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2562 polar amino acid ABC transport permease protein aapM-1.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0952 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.	0.894
Meso_1115	Meso_2304	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2562 polar amino acid ABC transport permease protein aapM-1.	Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tte:TTE0800 ABC-type sugar transport systems, permease components; TC 3.A.1.1.-.	0.624
Meso_1115	Meso_3556	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2562 polar amino acid ABC transport permease protein aapM-1.	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related Transport-associated OB; SMART: ATPase; KEGG: rsp:RSP_1445 ABC sugar transporter, ATPase subunit; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.	0.824
Meso_1115	Meso_3558	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2562 polar amino acid ABC transport permease protein aapM-1.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1443 ABC sugar transporter, inner membrane subunit; TC 3.A.1.1.-.	0.624
Meso_1115	Meso_3559	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2562 polar amino acid ABC transport permease protein aapM-1.	PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_1442 ABC sugar transporter, periplasmic sugar-binding protein; TC 3.A.1.1.-.	0.695
Meso_1563	Meso_0038	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0953 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.	PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_1481 ABC oligopeptide transporter, perplasmic substrate-binding protein OppA.	0.857
Meso_1563	Meso_1115	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0953 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2562 polar amino acid ABC transport permease protein aapM-1.	0.897
Meso_1563	Meso_1564	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0953 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0952 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.	0.984
Meso_1563	Meso_2304	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0953 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.	Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tte:TTE0800 ABC-type sugar transport systems, permease components; TC 3.A.1.1.-.	0.433
Meso_1563	Meso_3556	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0953 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related Transport-associated OB; SMART: ATPase; KEGG: rsp:RSP_1445 ABC sugar transporter, ATPase subunit; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.	0.822
Meso_1563	Meso_3558	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0953 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1443 ABC sugar transporter, inner membrane subunit; TC 3.A.1.1.-.	0.433