Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_3579PFAM: Nucleotidyl transferase; KEGG: mlo:mll5085 hypothetical protein. (252 aa)    
Predicted Functional Partners:
Meso_3578
PFAM: aminoglycoside phosphotransferase protein of unknown function UPF0079; KEGG: mlo:mll5086 hypothetical protein.
 
 
 0.992
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
    
 0.910
Meso_3577
PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like histidine kinase A-like; SMART: PAS; KEGG: mlo:mll5087 two-component sensor histidine kinase.
 
   0.870
Meso_2761
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.851
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
 0.832
Meso_0456
Mannose-6-phosphate isomerase, type 2; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II Nucleotidyl transferase Cupin 2, conserved barrel; KEGG: bms:BRA0347 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
  
  
 0.768
Meso_3580
DNA helicase/exodeoxyribonuclease V, subunit B; KEGG: mlo:mll5084 hypothetical protein.
 
     0.741
Meso_4088
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Redoxin; KEGG: sme:SMb20964 putative anti-oxidant protein, AhpCTSA family.
   
 0.735
Meso_3581
DNA helicase/exodeoxyribonuclease V, subunit A; PFAM: UvrD/REP helicase; KEGG: mlo:mll5083 ATP-dependent nuclease subunit A; Belongs to the helicase family. UvrD subfamily.
       0.704
Meso_2763
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
  
  
 0.658
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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