Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_3583Mg chelatase, subunit ChlI; KEGG: bms:BR2132 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit ATPase associated with various cellular activities, AAA_5; SMART: ATPase. (510 aa)    
Predicted Functional Partners:
Meso_3006
PFAM: phosphoribosyltransferase; KEGG: mlo:mll3453 hypothetical protein.
 
  
 0.822
Meso_1356
TIGRFAM: DNA protecting protein DprA; PFAM: SMF protein; KEGG: mlo:mlr0689 DNA processing chain A.
 
 
 0.786
Meso_1644
PFAM: ComEC/Rec2-related protein; KEGG: mlo:mll0627 DNA uptake protein.
 
  
 0.720
ruvC
Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
  
   
 0.655
Meso_3584
Hypothetical protein; KEGG: mta:Moth_2408 methicillin resistance protein.
 
     0.559
Meso_0301
PFAM: flagellar basal body rod protein protein of unknown function DUF1078-like; KEGG: mlo:mlr2907 flagellar basal-body rod protein flgF.
   
   0.552
Meso_4010
PFAM: protein of unknown function UPF0102; KEGG: mlo:mlr4633 predicted endonuclease; Belongs to the UPF0102 family.
 
  
 0.535
gshB
TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase-like glutathione synthetase, ATP-binding RimK-like ATP-grasp; KEGG: mlo:mll4735 glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
       0.451
nnrD
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
 
     0.410
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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