Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_3588PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: bme:BMEI1997 gluconolactonase. (292 aa)    
Predicted Functional Partners:
Meso_3587
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mlr4741 short chain dehydrogenase/reductase.
 
    0.825
Meso_0845
PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: atc:AGR_C_1271 2-dehydro-3-deoxygalactonokinase.
 
     0.684
Meso_0843
Galactose 1-dehydrogenase; PFAM: oxidoreductase-like Oxidoreductase-like; KEGG: sme:SMc00588 putative D-galactose 1-dehydrogenase protein.
 
  
 0.565
Meso_3525
Quinoprotein glucose dehydrogenase; PFAM: Pyrrolo-quinoline quinone; KEGG: ilo:IL0790 glucose dehydrogenase.
     
 0.521
Meso_0846
PFAM: KDPG and KHG aldolase; KEGG: sme:SMc00882 putative KHG/KDPG aldolase protein.
 
   
 0.510
Meso_3586
TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein EAL; KEGG: mlo:mlr4740 contains partial similarity to sensory box/GGDEF family protein(transmembrane protein).
       0.440
Meso_1237
Hypothetical protein.
    
  0.421
Meso_1487
KEGG: lpp:lpp0258 hypothetical protein.
    
  0.421
Meso_2409
Hypothetical protein.
    
  0.421
Meso_3589
PFAM: aldehyde dehydrogenase; KEGG: bmb:BruAb2_1092 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
  
  
 0.406
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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