Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Meso_3596Murein endopeptidase. Metallo peptidase. MEROPS family M74; PFAM: peptidase U6, penicillin-insensitive murein endopeptidase; KEGG: mlo:mlr4639 penicillin-insensitive murein endopeptidase A. (345 aa)    
Predicted Functional Partners:
Meso_2732
PFAM: protein of unknown function DUF882 Peptidase M15A; KEGG: bme:BMEII0010 hypothetical membrane associated protein.
  
     0.705
Meso_1417
PFAM: protein of unknown function DUF463, YcjX-like protein; KEGG: mlo:mlr0775 hypothetical protein.
  
     0.671
queG
Domain of unknown function DUF1730; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.
  
    0.641
Meso_1416
PFAM: conserved hypothetical protein 1620; KEGG: mlo:mlr0776 hypothetical protein.
  
     0.632
Meso_3597
PFAM: NAD-dependent epimerase/dehydratase; KEGG: mlo:mlr4637 hypothetical protein.
     
 0.632
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
       0.624
Meso_3599
PFAM: glutathione S-transferase-like; KEGG: mlo:mlr4635 glutathione S-transferase.
       0.624
glk
TIGRFAM: glucokinase; PFAM: Glucokinase; KEGG: mlo:mlr4640 glucokinase (glk); Belongs to the bacterial glucokinase family.
       0.602
Meso_3518
PFAM: ErfK/YbiS/YcfS/YnhG; KEGG: sme:SMc01200 hypothetical protein.
  
     0.578
Meso_4038
PFAM: ErfK/YbiS/YcfS/YnhG; KEGG: bms:BR0139 lipoprotein, putative.
  
     0.567
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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