Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_3632KEGG: mlo:mll7347 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily. (691 aa)    
Predicted Functional Partners:
Meso_3633
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH130 oligopeptide ABC transporter permease protein.
  
  0.864
Meso_3634
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0300 ABC transporter, permease.
  
  0.838
Meso_3631
PFAM: NADH:flavin oxidoreductase/NADH oxidase FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tte:TTE2131 NADH:flavin oxidoreductase, Old Yellow enzyme family.
     
 0.774
Meso_3635
PFAM: extracellular solute-binding protein, family 5; KEGG: ret:RHE_PC00130 probable peptide ABC transporter, substrate-binding protein.
  
  0.771
Meso_0076
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: sil:SPO2552 peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: binding-protein-dependent transport systems inner membrane component ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase.
 
0.767
Meso_3629
TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; KEGG: mag:amb1294 cystathionine beta-lyase/cystathionine gamma-synthase.
       0.642
Meso_3630
PFAM: Rhodanese-like; KEGG: cfa:474515 similar to 3-mercaptopyruvate sulfurtransferase.
       0.642
Meso_3641
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3343 ABC transporter permease protein.
 
  0.623
Meso_2061
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll1659 permease protein of oligopeptide ABC transporter.
 
  0.598
Meso_2060
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll1657 permease protein of dipeptide ABC transporter.
 
  0.586
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.