Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_3644KEGG: bbr:BB1105 hypothetical protein. (361 aa)    
Predicted Functional Partners:
Meso_3645
Transcriptional regulator, IclR family; PFAM: regulatory proteins, IclR; KEGG: reu:Reut_D6477 regulatory protein, IclR.
       0.773
Meso_1482
KEGG: bmb:BruAb1_1334 hypothetical acid-shock protein.
     
  0.648
folE
PFAM: GTP cyclohydrolase I; KEGG: mlo:mlr0922 GTP cyclohydrolase I.
   
   0.597
Meso_3646
PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; KEGG: bja:bll6709 probable ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.452
Meso_2580
TIGRFAM: amino acid adenylation domain; PFAM: beta-ketoacyl synthase AMP-dependent synthetase and ligase acyl transferase region condensation domain aminotransferase class-III phosphopantetheine-binding; KEGG: rpa:RPA3339 possible polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.451
Meso_0025
PFAM: Peptidoglycan-binding domain 1 Sel1-like repeat; KEGG: mlo:mll5622 hypothetical protein.
   
  0.422
smc
Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
    
  0.422
Meso_2209
KEGG: mlo:mll2809 hypothetical protein.
    
  0.422
Meso_3641
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3343 ABC transporter permease protein.
       0.408
Meso_3642
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3342 ABC transporter permease protein.
       0.408
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.