Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Meso_3689Transcriptional regulator, AraC family; PFAM: helix-turn-helix, AraC type; KEGG: mlo:mll2850 hypothetical protein. (303 aa)    
Predicted Functional Partners:
Meso_2488
Transcriptional regulator, AraC family; PFAM: helix-turn-helix, AraC type; KEGG: atc:AGR_L_475 hypothetical protein.
  
     0.603
Meso_0622
PFAM: helix-turn-helix, AraC type ThiJ/PfpI; KEGG: jan:Jann_3712 transcriptional regulator, AraC family.
  
 
 0.564
Meso_2048
PFAM: helix-turn-helix, AraC type; KEGG: ret:RHE_CH03443 transcriptional regulator protein, AraC family.
  
     0.555
Meso_3690
PFAM: protein of unknown function DUF1428; KEGG: mlo:mlr2642 hypothetical protein.
       0.554
Meso_1599
PFAM: helix-turn-helix, AraC type ThiJ/PfpI; KEGG: jan:Jann_3712 transcriptional regulator, AraC family.
  
 
 0.548
Meso_1501
PFAM: helix-turn-helix, AraC type ThiJ/PfpI; KEGG: jan:Jann_3712 transcriptional regulator, AraC family.
  
 
 0.546
Meso_2466
PFAM: helix-turn-helix, AraC type; KEGG: pae:PA0248 probable transcriptional regulator.
  
   0.542
Meso_0590
Transcriptional regulator, AraC family with amidase-like domain; PFAM: helix-turn-helix, AraC type ThiJ/PfpI; KEGG: atc:AGR_L_1109 hypothetical protein.
  
 
 0.507
Meso_2572
Transcriptional regulator, AraC family; PFAM: helix-turn-helix, AraC type AraC protein, arabinose-binding/dimerisation; KEGG: reu:Reut_B5021 helix-turn-helix, AraC type:AraC protein, arabinose-binding/dimerisation.
  
   0.463
Meso_2538
Transcriptional regulator, AraC family; PFAM: helix-turn-helix, AraC type AraC protein, arabinose-binding/dimerisation Cupin 2, conserved barrel; KEGG: pae:PA1599 probable transcriptional regulator.
  
   0.451
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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