Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Meso_3694PFAM: ABC transporter related; SMART: ATPase; KEGG: pst:PSPTO1075 O-antigen ABC transporter, ATP-binding protein, putative. (429 aa)    
Predicted Functional Partners:
Meso_3693
PFAM: ABC-2 type transporter; KEGG: neu:NE0472 ABC 2 transport system integral membrane protein.
 
 0.998
Meso_0491
PFAM: ABC-2 type transporter; KEGG: cef:CE0178 putative O-antigen export system permease protein.
 
 0.977
Meso_2757
PFAM: ABC-2 type transporter; KEGG: bpe:BP1623 putative polysialic acid transport protein.
  
 0.892
Meso_3695
PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: ade:Adeh_2459 methyltransferase type 11.
 
 
 0.860
Meso_2100
PFAM: ABC-2 type transporter; KEGG: ade:Adeh_3916 ABC transporter, inner membrane subunit.
  
 0.858
Meso_3697
PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: neu:NE0486 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.824
Meso_3696
PFAM: glycosyl transferase, group 1; KEGG: mma:MM1142 glycosyltransferase.
  
 
 0.812
Meso_2756
KEGG: sme:SMb20831 putative polysaccharide export-assoiated protein.
  
  
 0.720
Meso_2755
PFAM: Capsule polysaccharide biosynthesis; KEGG: syd:Syncc9605_2216 possible polysaccharide export protein.
  
  
 0.702
Meso_0456
Mannose-6-phosphate isomerase, type 2; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II Nucleotidyl transferase Cupin 2, conserved barrel; KEGG: bms:BRA0347 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
 
  
 0.596
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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