Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_3698PFAM: glycosyl transferase, family 2; KEGG: oih:OB2925 teichuronic acid biosynthesis. (256 aa)    
Predicted Functional Partners:
Meso_3699
Hypothetical protein; KEGG: ttj:TTHA0647 putative glycosyltransferase.
  
 
 0.792
Meso_1154
PFAM: sugar transferase; KEGG: mlo:mll8435 probable glycosyl transferase.
 
  
 0.610
Meso_0456
Mannose-6-phosphate isomerase, type 2; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II Nucleotidyl transferase Cupin 2, conserved barrel; KEGG: bms:BRA0347 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
 
  
 0.499
Meso_0653
PFAM: sugar transferase; KEGG: mlo:mll5252 exopolysaccharide production protein exoY.
  
 0.458
Meso_2589
PFAM: sugar transferase; KEGG: ret:RHE_CH03385 exopolysaccharide production protein.
  
 0.440
Meso_0660
TIGRFAM: exopolysaccharide transport protein family; PFAM: lipopolysaccharide biosynthesis; KEGG: mlo:mlr5276 exopolysaccharide polymerization protein, succinoglycan biosynthesis transport protein ExoP.
 
  
 0.414
Meso_2878
PFAM: glycosyl transferase, group 1; KEGG: sme:SMb21502 putative glycosyltransferase protein.
 
 
 0.405
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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