Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_3701PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: oih:OB2752 sorbitol dehydrogenase. (321 aa)    
Predicted Functional Partners:
xylA
TIGRFAM: xylose isomerase; PFAM: Xylose isomerase-like TIM barrel; KEGG: mlo:mlr5036 xylose isomerase; Belongs to the xylose isomerase family.
     
 0.908
Meso_0836
PfkB; PFAM: PfkB; KEGG: rsp:RSP_2257 putative fructokinase; Belongs to the carbohydrate kinase PfkB family.
  
 
 0.907
Meso_3703
5-dehydro-2-deoxygluconokinase; PFAM: PfkB; KEGG: plu:plu1801 unnamed protein product; similar to myo-inositol catabolism protein IolC of Bacillus subtilis; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.786
Meso_3700
Xylono-1,4-lactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: gox:GOX1793 transcriptional regulator.
  
    0.779
Meso_3702
Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR sugar isomerase (SIS); KEGG: hch:HCH_05772 transcriptional regulator.
       0.768
Meso_2930
PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: ttj:TTHA0466 alcohol dehydrogenase.
 
  
 0.736
Meso_2947
PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: pae:PA5234 quinone oxidoreductase.
 
  
 0.570
Meso_2784
PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: ret:RHE_PB00051 putative oxidoreductase protein.
  
     0.553
Meso_3287
PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: rso:RSc1203 NADPH quinone oxidoreductase, putative.
 
  
 0.551
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
 
  
 0.538
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.