Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_3762PFAM: Dak phosphatase; KEGG: bcl:ABC3609 dihydroxyacetone kinase. (204 aa)    
Predicted Functional Partners:
Meso_3761
Dihydroxyacetone kinase DhaK subunit; PFAM: Dak kinase; KEGG: mlo:mlr9018 putative glycerone kinase.
 
 
 0.997
Meso_1591
PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll0710 glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.821
Meso_1861
PFAM: FAD dependent oxidoreductase; KEGG: syn:sll1085 glycerol-3-phosphate dehydrogenase.
  
 
 0.821
gpsA
PFAM: UBA/THIF-type NAD/FAD binding fold NADP oxidoreductase, coenzyme F420-dependent NAD-dependent glycerol-3-phosphate dehydrogenase-like Ketopantoate reductase ApbA/PanE-like; KEGG: mlo:mlr4225 glycerol-3-phosphate dehydrogenase.
   
 
 0.805
Meso_3763
PFAM: aldo/keto reductase; KEGG: mlo:mll8386 oxido-reductase, and dehydratase MocA.
       0.610
Meso_3760
PFAM: Carboxymuconolactone decarboxylase; KEGG: mca:MCA0351 carboxymuconolactone decarboxylase domain protein.
       0.566
Meso_3759
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; KEGG: mlo:mlr2114 probable transcriptional regulator.
 
     0.468
hemF
Coproporphyrinogen oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
   
    0.400
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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