Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_3765PFAM: luciferase-like; KEGG: aci:ACIAD2543 conserved hypothetical protein; putative monooxygenase oxidoreductase protein. (352 aa)    
Predicted Functional Partners:
Meso_2580
TIGRFAM: amino acid adenylation domain; PFAM: beta-ketoacyl synthase AMP-dependent synthetase and ligase acyl transferase region condensation domain aminotransferase class-III phosphopantetheine-binding; KEGG: rpa:RPA3339 possible polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.908
Meso_2581
PFAM: condensation domain phosphopantetheine-binding; KEGG: ava:Ava_1613 non-ribosomal peptide synthase.
    
 0.830
Meso_3764
Hypothetical protein.
  
  
 0.693
Meso_3766
PFAM: aldehyde dehydrogenase; KEGG: pub:SAR11_0766 succinate-semialdehyde dehydrogenase (NAD(P)).
       0.605
Meso_1830
PFAM: NADPH-dependent FMN reductase; KEGG: bbr:BB0642 NADPH-dependent FMN reductase.
 
 
 0.491
Meso_1852
PFAM: NADPH-dependent FMN reductase; KEGG: ret:RHE_PC00012 probable NAD(P)H-dependent FMN reductase protein.
 
 
 0.485
Meso_3767
PFAM: helix-turn-helix, AraC type ThiJ/PfpI; KEGG: rpb:RPB_1140 transcriptional regulator, AraC family.
       0.434
Meso_2523
PFAM: flavin reductase-like, FMN-binding; KEGG: ret:RHE_PF00197 probable nitrilotriacetate monooxygenase component B protein.
 
  
 0.423
Meso_2521
PFAM: protein of unknown function DUF1185; KEGG: ret:RHE_PF00199 hypothetical protein.
 
     0.422
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.