Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Meso_3777PFAM: extracellular solute-binding protein, family 1; KEGG: sme:SMc01496 probable sorbitol-binding periplasmic protein. (436 aa)    
Predicted Functional Partners:
Meso_3778
Mannitol ABC transporter membrane protein / sorbitol ABC transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_839 maltose transport inner membrane protein.
 
 0.995
Meso_3779
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll4924 sorbitol/mannitol transport inner membrane protein.
 
 0.991
Meso_3780
PFAM: ABC transporter related TOBE Transport-associated OB; SMART: ATPase; KEGG: mlo:mll4923 unknown protein.
 
 0.979
Meso_3772
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO0539 probable sugar transporter membrane protein; TC 3.A.1.1.-.
  
 0.967
Meso_2710
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related TOBE Transport-associated OB; SMART: ATPase; KEGG: sme:SMc02869 putative ATP-binding ABC transporter protein; TC 3.A.1.1.-.
 
 0.943
Meso_3768
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related TOBE Transport-associated OB; SMART: ATPase; KEGG: ret:RHE_PF00090 probable sugar ABC transporter, ATP-binding protein; TC 3.A.1.1.-.
  
 0.936
Meso_1098
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related TOBE Transport-associated OB; SMART: ATPase; KEGG: ret:RHE_PF00090 probable sugar ABC transporter, ATP-binding protein; TC 3.A.1.1.-.
  
 0.928
Meso_3771
PFAM: extracellular solute-binding protein, family 1; KEGG: bmb:BruAb2_0484 sugar ABC transporter, periplasmic sugar-binding protein; TC 3.A.1.1.-.
 
  
 
0.924
Meso_2302
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related TOBE Transport-associated OB; SMART: ATPase; KEGG: tma:TM1276 putative multiple sugar transport system ATP-binding protein; TC 3.A.1.1.-.
  
 0.917
Meso_3776
Transcriptional regulator, DeoR family; PFAM: putative sugar-binding region; KEGG: mlo:mll4931 transcriptional regulator, operon regulator; SmoC.
 
   
 0.850
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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