Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_3784TIGRFAM: FGGY-family pentulose kinase; PFAM: carbohydrate kinase, FGGY; KEGG: mlo:mll4918 ribitol kinase. (529 aa)    
Predicted Functional Partners:
Meso_0005
PFAM: ribulose-phosphate 3-epimerase; KEGG: mlo:mlr4760 pentose(ribulose)-5-phosphate-3-epimerase.
   
 0.906
Meso_2515
TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: sme:SMb20371 putative sugar-phosphate isomerase protein.
    
  0.810
Meso_3782
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cme:CMR373C 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase Pfam: adh_short PROSITE: ADH_SHORT.
 
     0.808
rpiA
Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
     
  0.800
Meso_3946
6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
     
  0.800
Meso_3783
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3 HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: atc:AGR_L_828 hypothetical protein.
       0.787
Meso_3780
PFAM: ABC transporter related TOBE Transport-associated OB; SMART: ATPase; KEGG: mlo:mll4923 unknown protein.
     
 0.733
Meso_3781
PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: pst:PSPTO0363 sorbitol dehydrogenase.
       0.732
Meso_3779
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll4924 sorbitol/mannitol transport inner membrane protein.
  
    0.676
Meso_3778
Mannitol ABC transporter membrane protein / sorbitol ABC transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_839 maltose transport inner membrane protein.
  
  
 0.626
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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