Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
Meso_3870PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bja:bll7991 hypothetical protein. (214 aa)    
Predicted Functional Partners:
Meso_3869
KEGG: ana:asl7591 hypothetical protein.
 
    0.938
Meso_3878
PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: pae:PA3613 hypothetical protein.
 
     0.541
Meso_3877
TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; KEGG: hch:HCH_01517 phosphoribosylpyrophosphate synthetase.
 
     0.490
Meso_3871
PFAM: Cyclopropane-fatty-acyl-phospholipid synthase Methyltransferase type 11 Methyltransferase type 12; KEGG: rpa:RPA3082 cyclopropane-fatty-acyl-phospholipid synthase.
       0.488
Meso_3884
TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; PFAM: glyceraldehyde 3-phosphate dehydrogenase dihydrodipicolinate reductase; KEGG: mth:MTH1009 NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase.
 
     0.478
Meso_2667
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC copper-translocating P-type ATPase heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase YHS E1-E2 ATPase-associated region; KEGG: mlo:mlr5325 cation transporting P-type ATPase.
     0.444
Meso_3864
PFAM: protein of unknown function DUF6, transmembrane Protein of unknown function DUF250; KEGG: nfa:pnf1290 putative membrane protein.
  
    0.443
Meso_3879
PFAM: beta-lactamase-like RNA-metabolising metallo-beta-lactamase; KEGG: bpe:BP2609 metallo-beta-lactamase family protein.
 
     0.404
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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