Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_3881Hypothetical protein. (123 aa)    
Predicted Functional Partners:
Meso_3879
PFAM: beta-lactamase-like RNA-metabolising metallo-beta-lactamase; KEGG: bpe:BP2609 metallo-beta-lactamase family protein.
       0.528
Meso_3880
TIGRFAM: putative thymidine phosphorylase; PFAM: glycosyl transferase, family 3 Pyrimidine nucleoside phosphorylase-like; KEGG: hch:HCH_01516 thymidine phosphorylase.
       0.528
Meso_3878
PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: pae:PA3613 hypothetical protein.
       0.525
Meso_3882
TIGRFAM: Twin-arginine translocation pathway signal; PFAM: multicopper oxidase, type 1 multicopper oxidase, type 2 multicopper oxidase, type 3; KEGG: lpn:lpg0265 multicopper oxidase.
       0.520
Meso_3877
TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; KEGG: hch:HCH_01517 phosphoribosylpyrophosphate synthetase.
       0.423
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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