STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Meso_3882TIGRFAM: Twin-arginine translocation pathway signal; PFAM: multicopper oxidase, type 1 multicopper oxidase, type 2 multicopper oxidase, type 3; KEGG: lpn:lpg0265 multicopper oxidase. (499 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
   
 
 0.920
Meso_4048
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
 
 0.914
Meso_2667
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC copper-translocating P-type ATPase heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase YHS E1-E2 ATPase-associated region; KEGG: mlo:mlr5325 cation transporting P-type ATPase.
 
  
 0.729
Meso_3872
KEGG: tbd:Tbd_1323 hypothetical protein.
   
 
 0.725
Meso_2610
KEGG: rsp:RSP_2584 hypothetical protein.
  
  
 0.664
Meso_3876
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC copper-translocating P-type ATPase heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase E1-E2 ATPase-associated region; KEGG: tbd:Tbd_2740 heavy metal translocating P-type ATPase.
 
  
 0.617
Meso_2077
TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain; KEGG: sme:SMa1243 Azu1 pseudoazurin (blue copper protein).
   
 
 0.526
Meso_2245
TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain; KEGG: sme:SMc04047 probable pseudoazurin (blue copper protein).
   
 
 0.526
Meso_3881
Hypothetical protein.
       0.520
tatC
Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
    
 
 0.500
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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