Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_38852-octaprenylphenol hydroxylase; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: ABC-1; KEGG: pca:Pcar_2342 ubiquinone biosynthesis protein AarF, putative. (532 aa)    
Predicted Functional Partners:
Meso_3884
TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; PFAM: glyceraldehyde 3-phosphate dehydrogenase dihydrodipicolinate reductase; KEGG: mth:MTH1009 NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase.
   
   0.656
Meso_3886
Cardiolipin synthetase 2; PFAM: phospholipase D/Transphosphatidylase; KEGG: reu:Reut_A2710 phospholipase D/Transphosphatidylase; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
       0.520
Meso_3239
TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: mlo:mlr4251 2-octaprenyl-6-methoxyphenol 4-monoxygenase, ubiH.
  
 0.487
Meso_1696
TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: mlo:mlr0511 probable 2-octaprenyl-6-methoxyphenol 4-monoxygenase.
  
 0.466
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
  
 
 0.447
Meso_3883
Hypothetical protein.
       0.443
Meso_1623
PFAM: cyclase/dehydrase; KEGG: mlo:mlr0393 hypothetical protein.
    
 
 0.405
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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