Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_3899TIGRFAM: Twin-arginine translocation pathway signal; KEGG: mba:Mbar_A0781 hypothetical protein. (196 aa)    
Predicted Functional Partners:
Meso_3898
KEGG: ade:Adeh_3220 hypothetical protein.
 
     0.904
Meso_3900
PFAM: aldo/keto reductase; KEGG: ade:Adeh_3218 aldo/keto reductase.
    0.872
Meso_3911
KEGG: ade:Adeh_3213 hypothetical protein.
 
    0.694
Meso_3897
NmrA-like protein; PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase dTDP-4-dehydrorhamnose reductase NmrA-like Male sterility-like; KEGG: ade:Adeh_3216 NAD-dependent epimerase/dehydratase.
       0.676
Meso_3907
KEGG: mba:Mbar_A0780 hypothetical protein.
 
     0.636
Meso_3904
TIGRFAM: Twin-arginine translocation pathway signal; PFAM: aldo/keto reductase; KEGG: ade:Adeh_3215 aldo/keto reductase.
 
     0.630
Meso_4023
PFAM: aldo/keto reductase; KEGG: ade:Adeh_2028 2,5-didehydrogluconate reductase.
    0.627
Meso_3903
PFAM: aldo/keto reductase; KEGG: ecc:c0413 putative aldo/keto reductase.
 
     0.611
Meso_3909
PFAM: Cupin 2, conserved barrel; KEGG: bmb:BruAb2_0756 hypothetical protein.
 
     0.611
Meso_3912
KEGG: ypm:YP1844 hypothetical protein.
 
   
 0.601
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.