Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_3911KEGG: ade:Adeh_3213 hypothetical protein. (367 aa)    
Predicted Functional Partners:
Meso_3912
KEGG: ypm:YP1844 hypothetical protein.
 
 
 0.936
Meso_3909
PFAM: Cupin 2, conserved barrel; KEGG: bmb:BruAb2_0756 hypothetical protein.
 
    0.780
Meso_3910
PFAM: Carboxymuconolactone decarboxylase; KEGG: bja:bll4600 4-carboxymuconolactone decarboxylase, putative.
 
    0.758
Meso_3899
TIGRFAM: Twin-arginine translocation pathway signal; KEGG: mba:Mbar_A0781 hypothetical protein.
 
    0.694
Meso_3898
KEGG: ade:Adeh_3220 hypothetical protein.
 
 
   0.667
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
     
  0.648
Meso_2098
Transcriptional regulator; PFAM: Cupin 2, conserved barrel; KEGG: bme:BMEII0800 transcriptional regulator.
 
    0.646
Meso_3528
PFAM: Erythromycin esterase; KEGG: ppu:PP3231 hypothetical protein.
   
    0.584
Meso_0021
PFAM: Enoyl-CoA hydratase/isomerase 3-hydroxyacyl-CoA dehydrogenase-like 3-hydroxyacyl-CoA dehydrogenase, NAD-binding NAD-dependent glycerol-3-phosphate dehydrogenase-like; KEGG: mlo:mlr5629 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase.
    
 0.508
Meso_1524
PFAM: Enoyl-CoA hydratase/isomerase 3-hydroxyacyl-CoA dehydrogenase-like 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: nwi:Nwi_2993 3-hydroxyacyl-CoA dehydrogenase NAD-binding.
    
 0.508
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.