Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_3948Transcriptional regulator, AsnC family; PFAM: regulatory proteins, AsnC/Lrp; KEGG: ret:RHE_CH04051 putative transcriptional regulator protein. (78 aa)    
Predicted Functional Partners:
Meso_3949
PFAM: protein of unknown function DUF1498; KEGG: mlo:mlr8329 hypothetical protein.
       0.581
fur-2
Manganese uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: bmb:BruAb1_1641 hypothetical ferric uptake regulation protein; Belongs to the Fur family.
  
    0.538
Meso_3946
6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
       0.416
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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