Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Meso_3974PFAM: aldehyde dehydrogenase; KEGG: bms:BR0210 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family. (475 aa)    
Predicted Functional Partners:
Meso_1958
PFAM: aldehyde dehydrogenase; KEGG: bms:BR0210 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.901
Meso_0844
PFAM: aldehyde dehydrogenase; KEGG: sme:SMb20262 putative semialdehyde dehydrogenase protein.
     
 
0.900
Meso_3973
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mst:Msp_0290 predicted pyridoxal phosphate-dependent enzyme; Belongs to the DegT/DnrJ/EryC1 family.
       0.757
Meso_3971
PFAM: dihydrodipicolinate synthetase; KEGG: bja:bll7953 hypothetical protein; Belongs to the DapA family.
  
  
 0.612
Meso_3972
PFAM: Shikimate/quinate 5-dehydrogenase Shikimate dehydrogenase substrate binding-like; KEGG: bme:BMEII0871 shikimate 5-dehydrogenase.
     
 0.605
Meso_3970
PFAM: D-galactarate dehydratase/Altronate hydrolase-like; KEGG: atc:AGR_C_5115 probable D-galactarate dehydratase (GALCD).
     
 0.446
Meso_3969
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH GntR-like; KEGG: pfl:PFL_1360 transcriptional regulator, GntR family.
       0.419
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
      0.411
Meso_2744
PFAM: glutamine amidotransferase, class-II glutamate synthase, alpha subunit-like ferredoxin-dependent glutamate synthase glutamate synthase; KEGG: mlo:mll3030 glutamate synthase (NADPH) large chain.
  
  
 0.408
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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