Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Meso_4008PFAM: CsbD-like; KEGG: hch:HCH_05492 hypothetical protein; Belongs to the UPF0337 (CsbD) family. (65 aa)    
Predicted Functional Partners:
Meso_3110
PFAM: protein of unknown function DUF1328; KEGG: mlo:msr3702 hypothetical protein.
 
    0.869
Meso_3392
PFAM: protein of unknown function DUF1328; KEGG: mlo:msr4317 hypothetical protein.
  
    0.676
Meso_1526
KEGG: mlo:msr0042 hypothetical protein.
   
    0.662
Meso_2233
PFAM: CBS domain containing protein transport-associated; KEGG: sme:SMa1086 hypothetical protein.
  
    0.639
Meso_2264
PFAM: transport-associated; KEGG: pst:PSPTO1664 hypothetical protein.
  
    0.639
Meso_4009
PFAM: cytochrome P450; KEGG: mlo:mlr5192 similar to cytochrome P450.
  
    0.539
Meso_3240
PFAM: OsmC-like protein; KEGG: mlo:mlr4254 osmotically inducible protein C, putative ATP/GTP binding protein.
  
  
 0.534
Meso_3651
PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: ret:RHE_PC00206 hypothetical protein.
 
    0.518
Meso_3101
PFAM: PRC-barrel; KEGG: mlo:mll3685 hypothetical protein.
 
     0.464
Meso_2756
KEGG: sme:SMb20831 putative polysaccharide export-assoiated protein.
   
    0.462
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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