Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_4012Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: bja:blr0671 hypothetical protein; TC 3.A.1.4.-. (402 aa)    
Predicted Functional Partners:
Meso_0477
PFAM: inner-membrane translocator; KEGG: dvu:DVU0549 high-affinity branched-chain amino acid ABC transporter, permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.713
Meso_3324
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: bja:blr5672 ABC transporter permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.713
rsmI
Protein of unknown function UPF0011; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
   0.655
Meso_4010
PFAM: protein of unknown function UPF0102; KEGG: mlo:mlr4633 predicted endonuclease; Belongs to the UPF0102 family.
       0.617
Meso_2497
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: bbr:BB0402 putative branched-chain amino acid transport permease; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.608
Meso_0478
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: dar:Daro_0367 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.581
Meso_2498
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: ade:Adeh_2425 ABC branched-chain amino acid transporter, inner membrane subunit; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.581
Meso_3323
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: bja:blr5671 ABC transporter permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.581
Meso_1448
PFAM: response regulator receiver ANTAR; KEGG: mlo:mlr2855 two-component response regulator.
  
 
 0.514
Meso_0476
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: dps:DP2487 probable high-affinity branched-chain amino acid ABC transporter, ATP-binding protein; TC 3.A.1.4.-.
  
 
 0.512
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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