Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Meso_4041PFAM: response regulator receiver; KEGG: mlo:mlr5308 two-component, response regulator. (188 aa)    
Predicted Functional Partners:
Meso_4042
PFAM: ATP-binding region, ATPase-like histidine kinase A-like; KEGG: mlo:mlr5307 two-component, sensor histidine protein kinase.
 
 0.995
Meso_0191
KEGG: bmb:BruAb1_0281 hypothetical protein.
  
     0.702
Meso_4043
TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase-like helicase-associated region DEAD/DEAH box helicase-like Helicase ATP-dependent-like; KEGG: mlo:mlr5306 ATP-dependent helicase.
       0.592
Meso_0351
Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region; KEGG: atc:AGR_C_680 hypothetical protein.
  
     0.589
Meso_3424
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mlo:mlr4237 two-component response regulator.
  
 
 0.573
Meso_1904
KEGG: ret:RHE_PE00024 probable two-component sensor histidine kinase/response regulator hybrid protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like PAS fold-3 PAS fold-4 PAS fold; SMART: PAS PAC motif.
 
  
 0.553
Meso_3355
KEGG: mlo:mlr4340 hypothetical protein.
  
     0.522
Meso_2216
PFAM: protein of unknown function DUF1153; KEGG: mlo:msl2821 hypothetical protein.
  
     0.515
Meso_3416
PFAM: protein of unknown function DUF1674; KEGG: sil:SPO3377 hypothetical protein.
  
     0.493
Meso_1942
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver GAF ATP-binding region, ATPase-like histidine kinase A-like; KEGG: ppu:PP3761 sensor histidine kinase/response regulator.
  
 
 0.490
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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