STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_4065TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: pfo:Pfl_4892 cytochrome bd ubiquinol oxidase, subunit II. (334 aa)    
Predicted Functional Partners:
Meso_2425
PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: rpb:RPB_4670 cytochrome bd ubiquinol oxidase, subunit I.
 0.999
Meso_4066
PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: eba:ebA4639 cyanide insensitive terminal oxidase.
 0.999
Meso_2426
TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: rpa:RPA4794 putative cytochrome bd-quinol oxidase subunit II.
  
  
 
0.904
Meso_2165
Cytochrome b/b6-like protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
     
 0.846
Meso_3533
PFAM: cytochrome C oxidase subunit IV; KEGG: psp:PSPPH_1213 cytochrome o ubiquinol oxidase, subunit IV.
     
 0.824
Meso_2792
PFAM: cytochrome c oxidase, subunit II cytochrome c, class I; KEGG: sme:SMb21368 putative cytochrome c oxidase chain II protein.
  
 
 0.811
Meso_0742
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
    
 0.764
Meso_2475
PFAM: cytochrome c oxidase, subunit I; KEGG: sme:SMc01983 cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
    
 0.764
Meso_2791
PFAM: cytochrome c oxidase, subunit I; KEGG: sme:SMb21370 putative cytochrome c oxidase chain I protein; Belongs to the heme-copper respiratory oxidase family.
    
 0.764
Meso_0746
PFAM: cytochrome c oxidase, subunit III; KEGG: mlo:mlr7496 cytochrome c oxidase subunit III.
     
 0.727
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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