Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
Experiments
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[Homology]
Score
Meso_4088PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Redoxin; KEGG: sme:SMb20964 putative anti-oxidant protein, AhpCTSA family. (219 aa)    
Predicted Functional Partners:
Meso_0751
Redoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.928
Meso_3037
PFAM: Redoxin; KEGG: mlo:mll3505 thioredoxin-like protein.
  
 0.868
Meso_3362
TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: Redoxin; KEGG: bmb:BruAb1_0095 CycY, thiol:disulfide interchange protein, thioredoxin family.
  
 0.868
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.837
Meso_3220
Superoxide dismutase, copper/zinc binding protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 
 0.795
Meso_1837
BFD-like (2Fe-2S)-binding region; PFAM: HI0933-like protein FAD dependent oxidoreductase BFD-like [2Fe-2S]-binding region FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbr:BB0992 probable pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.766
Meso_2112
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mlo:mll2552 thioredoxin reductase.
  
 
 0.738
Meso_2206
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pae:PA4170 hypothetical protein.
  
 
 0.738
Meso_1931
PFAM: BFD-like [2Fe-2S]-binding region FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbr:BB0992 probable pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.737
Meso_3579
PFAM: Nucleotidyl transferase; KEGG: mlo:mll5085 hypothetical protein.
   
 0.735
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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