Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
KGK78665.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (68 aa)    
Predicted Functional Partners:
KGK78666.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     0.986
ttgA
Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.918
KGK78024.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.804
bepC
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.773
ttgE
Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
     0.757
cusB
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.748
KGK78865.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.651
KGK78867.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.651
KGK78869.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.651
KGK78264.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.651
Your Current Organism:
Thalassobacter stenotrophicus
NCBI taxonomy Id: 266809
Other names: CECT 5294, DSM 16310, Jannaschia cystaugens, Jannaschia cystaugens Adachi et al. 2004, LMG 22015 [[Jannaschia cystaugens]], LMG:22015 [[Jannaschia cystaugens]], NBRC 100362 [[Jannaschia cystaugens]], T. stenotrophicus, Thalassobacter oligotrophus, Thalassobacter sp. 1CONIMAR09, Thalassobacter stenotrophicus Macian et al. 2005, strain 5SM22, strain CFPB-A9 [[Jannaschia cystaugens]]
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