Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KGK78262.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (18586 aa)    
Predicted Functional Partners:
KGK78264.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.904
KGK78266.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.860
KGK80686.1
Heme peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.842
pufM
Photosynthetic reaction center subunit M; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
    
 
 0.822
KGK78265.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.782
KGK78267.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.777
KGK78182.1
Type IV secretion protein VirB3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.763
KGK79162.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.757
pufL
Photosynthetic reaction center subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the reaction center PufL/M/PsbA/D family.
    
   0.723
KGK80532.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.709
Your Current Organism:
Thalassobacter stenotrophicus
NCBI taxonomy Id: 266809
Other names: CECT 5294, DSM 16310, Jannaschia cystaugens, Jannaschia cystaugens Adachi et al. 2004, LMG 22015 [[Jannaschia cystaugens]], LMG:22015 [[Jannaschia cystaugens]], NBRC 100362 [[Jannaschia cystaugens]], T. stenotrophicus, Thalassobacter oligotrophus, Thalassobacter sp. 1CONIMAR09, Thalassobacter stenotrophicus Macian et al. 2005, strain 5SM22, strain CFPB-A9 [[Jannaschia cystaugens]]
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