STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL64478.1Stage V sporulation protein B. (513 aa)    
Predicted Functional Partners:
SFL50433.1
Outer membrane lipoprotein-sorting protein.
  
     0.669
SFL74975.1
Spore coat protein E.
  
    0.654
SFL67867.1
Protein YqhG of unknown function.
  
     0.652
SFM30974.1
Stage II sporulation protein E.
  
   
 0.640
SFL64501.1
Post-transcriptional regulator.
 
     0.637
SFL68241.1
Stage III sporulation protein AE.
  
    0.621
gpr
GPR endopeptidase Aspartic peptidase. MEROPS family A25; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
     0.599
SFL65889.1
Stage II sporulation protein P.
  
   
 0.592
SFL58616.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
  
   
 0.589
SFM06550.1
Stage IV sporulation protein FA.
  
    0.589
Your Current Organism:
Salibacterium qingdaonense
NCBI taxonomy Id: 266892
Other names: Bacillus qingdaonensis, Bacillus qingdaonensis Wang et al. 2007, Bacillus sp. CM1, CGMCC 1.6134, JCM 14087, S. qingdaonense, Salibacterium qingdaonense (Wang et al. 2007) Reddy et al. 2015, strain CM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.