Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL87738.1 | SFL92725.1 | SAMN04488054_10749 | SAMN04488054_10882 | Two-component system, response regulator, stage 0 sporulation protein F. | Hypothetical protein. | 0.422 |
SFL92699.1 | SFL92725.1 | SAMN04488054_10881 | SAMN04488054_10882 | DNA-binding transcriptional regulator, PadR family. | Hypothetical protein. | 0.796 |
SFL92725.1 | SFL87738.1 | SAMN04488054_10882 | SAMN04488054_10749 | Hypothetical protein. | Two-component system, response regulator, stage 0 sporulation protein F. | 0.422 |
SFL92725.1 | SFL92699.1 | SAMN04488054_10882 | SAMN04488054_10881 | Hypothetical protein. | DNA-binding transcriptional regulator, PadR family. | 0.796 |
SFL92725.1 | SFM06861.1 | SAMN04488054_10882 | SAMN04488054_11366 | Hypothetical protein. | Two-component system, chemotaxis family, response regulator CheY. | 0.422 |
SFL92725.1 | SFM10306.1 | SAMN04488054_10882 | SAMN04488054_11525 | Hypothetical protein. | Predicted ABC-type ATPase. | 0.407 |
SFL92725.1 | cinA | SAMN04488054_10882 | SAMN04488054_104188 | Hypothetical protein. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.732 |
SFM06861.1 | SFL92725.1 | SAMN04488054_11366 | SAMN04488054_10882 | Two-component system, chemotaxis family, response regulator CheY. | Hypothetical protein. | 0.422 |
SFM10306.1 | SFL92725.1 | SAMN04488054_11525 | SAMN04488054_10882 | Predicted ABC-type ATPase. | Hypothetical protein. | 0.407 |
cinA | SFL92725.1 | SAMN04488054_104188 | SAMN04488054_10882 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | Hypothetical protein. | 0.732 |