STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM28422.1L-iditol 2-dehydrogenase. (342 aa)    
Predicted Functional Partners:
SFM28404.1
Tripartite ATP-independent transporter solute receptor, DctP family.
       0.768
SFM28350.1
Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase.
    
  0.756
SFL47534.1
NADPH:quinone reductase.
  
  
  0.755
SFM28368.1
C4-dicarboxylate transporter, DctM subunit.
    
  0.755
SFM28387.1
TRAP-type C4-dicarboxylate transport system, small permease component.
       0.731
SFL47652.1
PTS system, fructose-specific IIC component.
  
 
  0.723
SFM08131.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
  
 
  0.723
SFM28445.1
Transcriptional regulator, GntR family.
       0.718
SFM17043.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.713
SFM28462.1
Uncharacterized conserved protein YgbK, DUF1537 family.
       0.638
Your Current Organism:
Salibacterium qingdaonense
NCBI taxonomy Id: 266892
Other names: Bacillus qingdaonensis, Bacillus qingdaonensis Wang et al. 2007, Bacillus sp. CM1, CGMCC 1.6134, JCM 14087, S. qingdaonense, Salibacterium qingdaonense (Wang et al. 2007) Reddy et al. 2015, strain CM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.