STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0020Hypothetical protein. (53 aa)    
Predicted Functional Partners:
Krad_0015
PFAM: virulence factor MVIN family protein; KEGG: dvu:DVU3063 integral membrane protein MviN.
       0.529
Krad_0016
PFAM: glycosyl transferase group 1; KEGG: reh:H16_A2887 glycosyltransferase, probably involved in lipopolysaccharide biosynthesis.
       0.529
Krad_0017
PFAM: glycosyl transferase group 1; KEGG: gbe:GbCGDNIH1_0244 glycosyltransferase.
       0.529
Krad_0018
PFAM: O-antigen polymerase; KEGG: syw:SYNW0284 possible bicarbonate transporter, ICT family.
       0.529
Krad_0019
PFAM: glycosyl transferase group 1; KEGG: art:Arth_3205 glycosyl transferase, group 1.
       0.529
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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