STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0029KEGG: mva:Mvan_2826 conserved hypothetical protein. (141 aa)    
Predicted Functional Partners:
Krad_0026
PFAM: protein of unknown function DUF881; KEGG: ace:Acel_0015 protein of unknown function DUF881.
       0.631
Krad_0027
TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: ace:Acel_0016 sortase family protein.
       0.631
Krad_0028
KEGG: tfu:Tfu_2382 hypothetical protein.
       0.631
Krad_0030
TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: tfu:Tfu_2526 cell envelope-related transcriptional attenuator.
       0.532
crgA
Protein of unknown function UPF0233; Involved in cell division; Belongs to the CrgA family.
       0.452
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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