STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0031PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: art:Arth_0834 inositol 2-dehydrogenase. (341 aa)    
Predicted Functional Partners:
Krad_4055
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rha:RHA1_ro01354 possible myo-inositol catabolism protein.
 
 
  0.980
Krad_1553
PFAM: inositol monophosphatase; KEGG: fra:Francci3_1313 inositol-1(or 4)-monophosphatase.
    
 0.904
Krad_2135
PFAM: inositol monophosphatase; KEGG: sma:SAV372 myo-inositol 1-monophosphatase.
    
 0.904
Krad_4056
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rha:RHA1_ro01353 probable acetolactate synthase; Belongs to the TPP enzyme family.
 
  
 0.851
Krad_4057
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: rha:RHA1_ro01352 myo-inositol catabolism IolB protein.
 
  
 0.839
Krad_4059
PFAM: PfkB domain protein; KEGG: msm:MSMEG_4661 sugar kinase, ribokinase family protein.
 
    0.710
Krad_4054
KEGG: mva:Mvan_4011 periplasmic binding protein/LacI transcriptional regulator.
 
    0.588
Krad_1859
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: aau:AAur_1887 oxidoreductase family, NAD-binding Rossmann fold domain protein.
  
     0.584
Krad_4052
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV7153 putative sugar ABC transporter ATP-binding protein.
 
    0.582
Krad_0032
Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sma:SAV7156 LacI-family transcriptional regulator.
       0.544
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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