STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0035KEGG: tfu:Tfu_0013 putative integral membrane protein. (236 aa)    
Predicted Functional Partners:
Krad_3151
KEGG: fra:Francci3_3164 hypothetical protein.
  
   
 0.682
Krad_2009
TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; Stage II sporulation E family protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; protein phosphatase 2C domain protein; KEGG: sco:SCO7759 DNA-binding protein.
 
     0.607
Krad_2756
PFAM: protein of unknown function DUF350; KEGG: nfa:nfa34930 hypothetical protein.
  
     0.599
Krad_2758
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: tfu:Tfu_1658 tyrosine protein kinase:serine/threonine protein kinase:Sel1-like repeat.
  
     0.592
Krad_2025
TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; Stage II sporulation E family protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; protein phosphatase 2C domain protein; KEGG: sco:SCO7448 hypothetical protein.
 
     0.582
Krad_1895
PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: ace:Acel_0587 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins.
  
     0.572
Krad_0947
TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; Stage II sporulation E family protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; protein phosphatase 2C domain protein; KEGG: sco:SCO7759 DNA-binding protein.
 
     0.570
Krad_0098
TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; Stage II sporulation E family protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; protein phosphatase 2C domain protein; KEGG: sco:SCO3679 hypothetical protein.
 
     0.567
Krad_0447
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein.
 
     0.555
Krad_0034
KEGG: tfu:Tfu_0160 hypothetical protein.
       0.532
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.