STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0065Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; KEGG: sco:SCO5829 putative two-component sensor. (529 aa)    
Predicted Functional Partners:
Krad_0064
Response regulator receiver and unknown domain protein; PFAM: response regulator receiver; KEGG: fal:FRAAL2991 putative two-component system response regulator.
 
 0.980
Krad_0517
Two component transcriptional regulator, Fis family; PFAM: response regulator receiver; KEGG: sma:SAV2817 putative two-component system response regulator.
 
 0.918
Krad_0066
PFAM: Uncharacterized protein UPF0065; KEGG: dge:Dgeo_0833 uncharacterized protein UPF0065.
 
    0.833
Krad_0067
KEGG: sco:SCO1139 integral membrane protein.
 
     0.818
Krad_0068
PFAM: protein of unknown function DUF112 transmembrane; KEGG: art:Arth_1393 protein of unknown function DUF112, transmembrane.
 
     0.804
Krad_0069
PFAM: UspA domain protein; KEGG: aau:AAur_0701 putative universal stress family domain protein.
       0.547
Krad_4122
PFAM: ATP-binding region ATPase domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sma:SAV3185 magnesium or manganese-dependent protein phosphatase.
      0.512
Krad_0347
TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; Stage II sporulation E family protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; protein phosphatase 2C domain protein.
 
    0.501
Krad_0515
PFAM: sodium:dicarboxylate symporter; KEGG: mva:Mvan_4696 sodium:dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
  
 0.486
Krad_0401
Putative PAS/PAC sensor protein; PFAM: GAF domain protein; Stage II sporulation E family protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; protein phosphatase 2C domain protein; KEGG: fal:FRAAL4851 putative regulatory protein.
      0.440
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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