STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0066PFAM: Uncharacterized protein UPF0065; KEGG: dge:Dgeo_0833 uncharacterized protein UPF0065. (345 aa)    
Predicted Functional Partners:
Krad_0067
KEGG: sco:SCO1139 integral membrane protein.
 
  
 0.992
Krad_0068
PFAM: protein of unknown function DUF112 transmembrane; KEGG: art:Arth_1393 protein of unknown function DUF112, transmembrane.
 
  
 0.991
Krad_0065
Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; KEGG: sco:SCO5829 putative two-component sensor.
 
    0.833
Krad_0069
PFAM: UspA domain protein; KEGG: aau:AAur_0701 putative universal stress family domain protein.
 
     0.830
Krad_0064
Response regulator receiver and unknown domain protein; PFAM: response regulator receiver; KEGG: fal:FRAAL2991 putative two-component system response regulator.
 
    0.819
Krad_0517
Two component transcriptional regulator, Fis family; PFAM: response regulator receiver; KEGG: sma:SAV2817 putative two-component system response regulator.
 
    0.525
Krad_0516
Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; KEGG: nfa:nfa46340 putative two-component system sensor kinase.
 
    0.485
Krad_0070
Hypothetical protein; KEGG: afm:Afu2g17000 PT repeat family.
       0.443
Krad_3869
PFAM: putative ammonia monooxygenase; KEGG: mva:Mvan_1609 putative ammonia monooxygenase.
 
    0.431
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.