STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0137PFAM: NmrA family protein; KEGG: sma:SAV883 hypothetical protein. (285 aa)    
Predicted Functional Partners:
Krad_0086
PFAM: NmrA family protein; KEGG: art:Arth_3950 NmrA family protein.
  
  
 
0.923
Krad_2655
NmrA family protein; PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: fal:FRAAL6795 putative oxidoreductase.
  
  
 
0.922
Krad_0862
NmrA family protein; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: fal:FRAAL6795 putative oxidoreductase.
  
  
 
0.920
Krad_2859
PFAM: NAD(P)H dehydrogenase (quinone); KEGG: msm:MSMEG_0284 ribosyldihydronicotinamide dehydrogenase (quinone).
  
 
  0.903
menG
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
     
  0.900
Krad_1341
PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: nca:Noca_0636 flavodoxin/nitric oxide synthase.
    
  0.900
Krad_0136
PFAM: regulatory protein TetR; KEGG: sma:SAV882 TetR-family transcriptional regulator.
 
     0.671
Krad_3252
PFAM: Rieske [2Fe-2S] domain protein; KEGG: aau:AAur_2209 ubiquinol-cytochrome c reductase iron-sulfur subunit.
  
 
 0.645
acpP
Phosphopantetheine-binding; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 0.639
Krad_1467
PFAM: peptidase M16 domain protein; KEGG: aau:AAur_1571 putative Zn-dependent peptidases, family M16; Belongs to the peptidase M16 family.
   
 
 0.576
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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