STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0150Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sco:SCO5840 transcriptional regulator. (209 aa)    
Predicted Functional Partners:
Krad_0148
Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: art:Arth_0896 gamma-glutamyltransferase.
       0.779
Krad_4399
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rxy:Rxyl_0554 GntR-like protein.
  
  
 0.779
Krad_0185
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mlo:mlr8380 hypothetical protein.
  
     0.775
Krad_1921
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: art:Arth_0882 transcriptional regulator, GntR family.
  
     0.775
Krad_3643
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: art:Arth_0882 transcriptional regulator, GntR family.
  
     0.775
Krad_0145
PFAM: extracellular solute-binding protein family 5; KEGG: bja:bll2868 ABC transporter substrate-binding protein.
       0.773
Krad_0146
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psp:PSPPH_2785 ABC-transport protein, inner membrane component.
       0.773
Krad_0147
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB2519 probable ABC-transport protein, inner membrane component.
       0.773
Krad_0149
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mbb:BCG_3721c putative dipeptide-transport ATP-binding protein ABC transporter DppD; Belongs to the ABC transporter superfamily.
       0.773
Krad_3893
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mkm:Mkms_5416 GntR domain protein.
  
  
 0.643
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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