STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0156Putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: fra:Francci3_4050 serine phosphatase. (132 aa)    
Predicted Functional Partners:
Krad_1581
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: sco:SCO4120 hypothetical protein.
  
     0.773
Krad_1542
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: ace:Acel_2036 hypothetical protein.
  
     0.760
Krad_1475
PFAM: protein of unknown function DUF1469; KEGG: sma:SAV6345 integral membrane protein.
  
     0.580
Krad_0063
PFAM: SpoOM family protein; KEGG: fra:Francci3_2907 SpoOM.
  
     0.530
Krad_0484
Putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
     0.504
Krad_0034
KEGG: tfu:Tfu_0160 hypothetical protein.
  
     0.492
Krad_0157
PFAM: protein of unknown function UPF0016; KEGG: nca:Noca_0167 protein of unknown function UPF0016.
       0.478
Krad_2898
KEGG: nca:Noca_2575 hypothetical protein.
  
     0.457
Krad_0122
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: fal:FRAAL4021 putative sigma factor PP2C-like phosphatases.
  
     0.442
Krad_3966
KEGG: fra:Francci3_0675 hypothetical protein.
  
     0.441
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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